Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar kinase | C3433_13790 | Not Available | Negative | 2843295 - 2844242 | 34298.2 |
| ketose-bisphosphate aldolase | C3433_13795 | Not Available | Negative | 2844247 - 2845083 | 30758.5 |
| alcohol dehydrogenase | C3433_13800 | Not Available | Negative | 2845108 - 2846151 | 37576.7 |
| mfs transporter | C3433_13805 | Not Available | Negative | 2846169 - 2847548 | 49689.0 |
| alcohol dehydrogenase | C3433_13810 | Not Available | Negative | 2847576 - 2848652 | 38812.0 |
| chitinase | C3433_13815 | Not Available | Positive | 2848950 - 2850203 | 45858.4 |
| hnh endonuclease | C3433_13820 | Not Available | Positive | 2850298 - 2850642 | 13270.6 |
| duf1315 domain-containing protein | C3433_13825 | Not Available | Negative | 2850687 - 2850962 | 10335.5 |
| peptide-methionine (r)-s-oxide reductase | C3433_13830 | Not Available | Negative | 2851005 - 2851418 | 15542.1 |
| glyceraldehyde-3-phosphate dehydrogenase | C3433_13835 | Not Available | Positive | 2851760 - 2852755 | 35616.5 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

