Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna topoisomerase iii | C3433_13740 | Not Available | Negative | 2831168 - 2833114 | 72784.2 |
| selenide, water dikinase seld | C3433_13745 | Not Available | Negative | 2833119 - 2834162 | 36446.1 |
| nad(p)h nitroreductase | C3433_13750 | Not Available | Negative | 2834279 - 2834830 | 20008.1 |
| signal peptide peptidase sppa | C3433_13755 | Not Available | Positive | 2835006 - 2836862 | 67026.9 |
| arac family transcriptional regulator | C3433_13760 | Not Available | Negative | 2836897 - 2837964 | 39369.6 |
| l-asparaginase 1 | C3433_13765 | Not Available | Positive | 2838202 - 2839218 | 36947.3 |
| bifunctional nicotinamidase/pyrazinamidase | C3433_13770 | Not Available | Positive | 2839232 - 2839870 | 23095.1 |
| mfs transporter | C3433_13775 | Not Available | Negative | 2839908 - 2841266 | 50174.9 |
| deor/glpr transcriptional regulator | C3433_13780 | Not Available | Negative | 2841407 - 2842165 | 28355.1 |
| aldo/keto reductase | C3433_13785 | Not Available | Negative | 2842302 - 2843285 | 36488.1 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

