Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hemin-degrading factor | C3433_13130 | Not Available | Positive | 2737519 - 2738550 | 38338.6 |
| hemin abc transporter substrate-binding protein | C3433_13135 | Not Available | Positive | 2738547 - 2739368 | 28871.1 |
| iron abc transporter | C3433_13140 | Not Available | Positive | 2739368 - 2740360 | 34952.4 |
| heme abc transporter atp-binding protein | C3433_13145 | Not Available | Positive | 2740353 - 2741132 | 28640.8 |
| ydiu family protein | C3433_13150 | Not Available | Negative | 2741129 - 2742571 | 54798.4 |
| eal domain-containing protein | C3433_13155 | Not Available | Negative | 2742633 - 2743346 | 26329.9 |
| endopeptidase | C3433_13160 | Not Available | Negative | 2743666 - 2744130 | 17366.7 |
| vitamin b12 abc transporter atp-binding protein btud | C3433_13165 | Not Available | Negative | 2744208 - 2744957 | 27083.9 |
| glutathione peroxidase | C3433_13170 | Not Available | Negative | 2744957 - 2745508 | 20384.3 |
| vitamin b12 abc transporter permease btuc | C3433_13175 | Not Available | Negative | 2745569 - 2746549 | 34962.4 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

