Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-glucosidase | C3433_13030 | Not Available | Negative | 2711947 - 2714322 | 86265.2 |
| mfs transporter | C3433_13035 | Not Available | Negative | 2714326 - 2715726 | 51922.4 |
| duf1870 domain-containing protein | C3433_13040 | Not Available | Positive | 2716029 - 2716385 | 14006.7 |
| mfs transporter | C3433_13045 | Not Available | Positive | 2716434 - 2717654 | 44452.6 |
| mfs transporter | C3433_13050 | Not Available | Positive | 2717895 - 2719130 | 44818.5 |
| quinate/shikimate dehydrogenase | C3433_13055 | Not Available | Positive | 2719153 - 2720019 | 31349.9 |
| type i 3-dehydroquinate dehydratase | C3433_13060 | Not Available | Positive | 2720056 - 2720814 | 27372.2 |
| acetate coa-transferase ydif | C3433_13065 | Not Available | Positive | 2720971 - 2722566 | 57382.4 |
| acyl-coa dehydrogenase | C3433_13070 | Not Available | Positive | 2722580 - 2723731 | 42988.5 |
| arac family transcriptional regulator | C3433_13075 | Not Available | Negative | 2723786 - 2724676 | 34245.6 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

