Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | C3433_12925 | Not Available | Negative | 2691801 - 2692469 | 23609.7 |
| methionine abc transporter atp-binding protein | C3433_12930 | Not Available | Negative | 2692462 - 2693484 | 37377.2 |
| hypothetical protein | C3433_12935 | Not Available | Negative | 2693675 - 2693875 | 7532.25 |
| pyruvate kinase | C3433_12940 | Not Available | Positive | 2694060 - 2695472 | 50633.4 |
| major outer membrane lipoprotein | C3433_12945 | Not Available | Positive | 2695782 - 2696018 | 8334.87 |
| murein l,d-transpeptidase | C3433_12950 | Not Available | Negative | 2696087 - 2697091 | 36178.7 |
| cysteine desulfuration protein sufe | C3433_12955 | Not Available | Negative | 2697215 - 2697631 | 15650.0 |
| cysteine desulfurase sufs | C3433_12960 | Not Available | Negative | 2697644 - 2698864 | 44563.5 |
| signal peptide peptidase sppa | C3433_12965 | Not Available | Negative | 2698861 - 2700132 | 46804.6 |
| fe-s cluster assembly atpase sufc | C3433_12970 | Not Available | Negative | 2700107 - 2700853 | 27609.9 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

