Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione peroxidase | C3433_12720 | Not Available | Positive | 2650082 - 2650564 | 17494.3 |
| Trna-val | Not Available | Not Available | Positive | 2650763 - 2650839 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 2650844 - 2650920 | Not Available |
| molybdate abc transporter substrate-binding protein | C3433_12735 | Not Available | Positive | 2651091 - 2651813 | 26369.5 |
| abc transporter atp-binding protein | C3433_12740 | Not Available | Negative | 2651800 - 2652552 | 27265.2 |
| abc transporter permease | C3433_12745 | Not Available | Negative | 2652549 - 2653553 | 35874.2 |
| hypothetical protein | C3433_12750 | Not Available | Negative | 2653540 - 2654595 | 39268.4 |
| 4-aminobutyrate--2-oxoglutarate transaminase | C3433_12755 | Not Available | Negative | 2654776 - 2656038 | 44602.6 |
| decarboxylase | C3433_12760 | Not Available | Positive | 2656144 - 2657619 | 54860.2 |
| alcohol dehydrogenase | C3433_12765 | Not Available | Negative | 2657663 - 2658871 | 43300.8 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

