Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | C3433_12670 | Not Available | Positive | 2637873 - 2639477 | 59553.2 |
| voc family protein | C3433_12675 | Not Available | Positive | 2640171 - 2640536 | 13262.6 |
| ai-2e family transporter | C3433_12680 | Not Available | Positive | 2640711 - 2641820 | 40245.1 |
| hypothetical protein | C3433_12685 | Not Available | Positive | 2641940 - 2643724 | 66483.2 |
| tryptophan--trna ligase | C3433_12690 | Not Available | Positive | 2643943 - 2644947 | 36601.5 |
| hypothetical protein | C3433_12695 | Not Available | Negative | 2645055 - 2646098 | 40603.2 |
| yebc/pmpr family dna-binding transcriptional regulator | C3433_12700 | Not Available | Positive | 2646629 - 2647345 | 25844.4 |
| arac family transcriptional regulator | C3433_12705 | Not Available | Positive | 2647713 - 2648693 | 36312.7 |
| type i glyceraldehyde-3-phosphate dehydrogenase | C3433_12710 | Not Available | Positive | 2648772 - 2649782 | 35946.8 |
| hypothetical protein | C3433_12715 | Not Available | Negative | 2649895 - 2650083 | 7200.02 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

