Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endopeptidase | C3433_12565 | Not Available | Positive | 2617911 - 2618741 | 30500.8 |
| superoxide dismutase | C3433_12570 | Not Available | Positive | 2618869 - 2619450 | 21288.8 |
| mfs transporter | C3433_12575 | Not Available | Negative | 2619489 - 2620658 | 40097.5 |
| ynhf family membrane protein | C3433_12580 | Not Available | Negative | 2620834 - 2620923 | 2955.79 |
| hth-type transcriptional repressor purr | C3433_12590 | Not Available | Positive | 2621221 - 2622246 | 38106.8 |
| lysr family transcriptional regulator | C3433_12595 | Not Available | Negative | 2622243 - 2623175 | 35168.7 |
| bcr/cfla family multidrug efflux mfs transporter | C3433_12600 | Not Available | Positive | 2623289 - 2624494 | 43043.4 |
| cyclopropane-fatty-acyl-phospholipid synthase | C3433_12605 | Not Available | Positive | 2624785 - 2625933 | 43880.3 |
| riboflavin synthase | C3433_12610 | Not Available | Negative | 2625975 - 2626622 | 23500.4 |
| multidrug transporter mdtk | C3433_12615 | Not Available | Positive | 2626840 - 2628213 | 49399.0 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

