Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux transporter periplasmic adaptor subunit | C3433_12515 | Not Available | Positive | 2609408 - 2610271 | 31693.7 |
| fusaric acid resistance protein | C3433_12520 | Not Available | Positive | 2610268 - 2612283 | 75447.4 |
| superoxide dismutase | C3433_12525 | Not Available | Negative | 2612284 - 2612808 | 17730.3 |
| oxidoreductase | C3433_12530 | Not Available | Negative | 2612890 - 2613786 | 33493.4 |
| duf1289 domain-containing protein | C3433_12535 | Not Available | Negative | 2613836 - 2614075 | 9426.3 |
| tetr family transcriptional regulator | C3433_12540 | Not Available | Positive | 2614177 - 2614776 | 22049.6 |
| alkene reductase | C3433_12545 | Not Available | Positive | 2614831 - 2615928 | 39423.5 |
| lactoylglutathione lyase | C3433_12550 | Not Available | Positive | 2616026 - 2616433 | 14907.6 |
| ribonuclease t | C3433_12555 | Not Available | Positive | 2616528 - 2617175 | 23576.2 |
| glutaredoxin | C3433_12560 | Not Available | Negative | 2617229 - 2617576 | 12923.5 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

