Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription modulator ydgt | C3433_12415 | Not Available | Positive | 2593150 - 2593365 | 8331.93 |
| duf2569 domain-containing protein | C3433_12420 | Not Available | Positive | 2593457 - 2593897 | 16315.6 |
| electron transport complex subunit a | C3433_12425 | Not Available | Positive | 2593974 - 2594555 | 20870.8 |
| electron transport complex subunit rsxb | C3433_12430 | Not Available | Positive | 2594555 - 2595133 | 20568.9 |
| electron transport complex subunit rsxc | C3433_12435 | Not Available | Positive | 2595126 - 2597243 | 75922.9 |
| electron transport complex subunit rsxd | C3433_12440 | Not Available | Positive | 2597244 - 2598296 | 37816.9 |
| electron transport complex subunit rsxg | C3433_12445 | Not Available | Positive | 2598306 - 2598926 | 21914.0 |
| electron transport complex subunit rsxe | C3433_12450 | Not Available | Positive | 2598930 - 2599622 | 24250.3 |
| endonuclease iii | C3433_12455 | Not Available | Positive | 2599622 - 2600257 | 23477.6 |
| hypothetical protein | C3433_12460 | Not Available | Negative | 2600481 - 2600681 | 7720.51 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

