Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component sensor histidine kinase | C3433_12215 | Not Available | Negative | 2548557 - 2550047 | 55315.1 |
| dna-binding response regulator | C3433_12220 | Not Available | Negative | 2550044 - 2550766 | 27230.8 |
| protein-methionine-sulfoxide reductase catalytic subunit msrp | C3433_12225 | Not Available | Positive | 2550956 - 2551960 | 37500.8 |
| protein-methionine-sulfoxide reductase heme-binding subunit msrq | C3433_12230 | Not Available | Positive | 2551961 - 2552587 | 23660.1 |
| carboxypeptidase m32 | C3433_12235 | Not Available | Positive | 2552634 - 2554121 | 55793.7 |
| acid-shock protein | C3433_12240 | Not Available | Positive | 2554259 - 2554675 | 14175.2 |
| serine protease | C3433_12245 | Not Available | Positive | 2554946 - 2555767 | 29431.1 |
| multidrug/spermidine transporter subunit mdti | C3433_12250 | Not Available | Negative | 2555802 - 2556131 | 11671.7 |
| multidrug/spermidine transporter subunit mdtj | C3433_12255 | Not Available | Negative | 2556118 - 2556480 | 12849.4 |
| hypothetical protein | C3433_12260 | Not Available | Negative | 2556591 - 2556761 | 6575.04 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

