Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C3433_12065 | Not Available | Negative | 2518309 - 2518527 | 8146.99 |
| hypothetical protein | C3433_12070 | Not Available | Negative | 2518735 - 2519226 | 18494.2 |
| transcriptional regulator | C3433_12075 | Not Available | Negative | 2519210 - 2520019 | 30486.4 |
| hypothetical protein | C3433_12080 | Not Available | Positive | 2520355 - 2521155 | 29591.7 |
| hypothetical protein | C3433_12085 | Not Available | Positive | 2521216 - 2521746 | 20723.3 |
| peptidyl-dipeptidase dcp | C3433_12090 | Not Available | Negative | 2521963 - 2524008 | 77660.6 |
| bifunctional nadp-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase ydfg | C3433_12095 | Not Available | Positive | 2524146 - 2524892 | 27292.5 |
| gntr family transcriptional regulator | C3433_12100 | Not Available | Positive | 2524979 - 2525665 | 26441.7 |
| selenoprotein ydfz | C3433_12105 | Not Available | Positive | 2525856 - 2526059 | 7373.9 |
| d-mannonate oxidoreductase | C3433_12110 | Not Available | Negative | 2526136 - 2527602 | 53716.6 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

