Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deor family transcriptional regulator | C3433_11955 | Not Available | Negative | 2497473 - 2498234 | 27786.5 |
| 4-hydroxythreonine-4-phosphate dehydrogenase | C3433_11960 | Not Available | Negative | 2498236 - 2499222 | 35089.4 |
| hypothetical protein | C3433_11965 | Not Available | Negative | 2499215 - 2500459 | 44127.0 |
| alcohol dehydrogenase | C3433_11970 | Not Available | Positive | 2500631 - 2501800 | 41243.2 |
| dihydrodipicolinate synthase family protein | C3433_11975 | Not Available | Positive | 2501793 - 2502677 | 31628.8 |
| mfs transporter | C3433_11985 | Not Available | Positive | 2503788 - 2505056 | 46622.7 |
| sugar transporter | C3433_11990 | Not Available | Positive | 2505232 - 2506428 | 42581.8 |
| stress protection protein marc | C3433_11995 | Not Available | Negative | 2506479 - 2507144 | 23524.6 |
| multiple antibiotic resistance transcriptional regulator marr | C3433_12000 | Not Available | Positive | 2507402 - 2507836 | 16257.2 |
| mdr efflux pump acrab transcriptional activator mara | C3433_12005 | Not Available | Positive | 2507849 - 2508238 | 15394.4 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

