Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acref/envcd operon transcriptional regulator | C3433_11835 | Not Available | Negative | 2475950 - 2476606 | 24819.1 |
| efflux transporter periplasmic adaptor subunit | C3433_11840 | Not Available | Positive | 2477018 - 2478178 | 41107.7 |
| hydrophobe/amphiphile efflux-1 family rnd transporter | C3433_11845 | Not Available | Positive | 2478190 - 2481303 | 112261.0 |
| hypothetical protein | C3433_11850 | Not Available | Positive | 2481574 - 2481795 | 7424.06 |
| amino acid abc transporter substrate-binding protein | C3433_11855 | Not Available | Positive | 2482255 - 2483280 | 36979.8 |
| amino acid abc transporter permease | C3433_11860 | Not Available | Positive | 2483350 - 2484531 | 43495.2 |
| amino acid abc transporter permease | C3433_11865 | Not Available | Positive | 2484541 - 2485644 | 41452.6 |
| amino acid abc transporter atp-binding protein | C3433_11870 | Not Available | Positive | 2485652 - 2486410 | 28660.1 |
| Trna-thr | Not Available | Not Available | Positive | 2486823 - 2486898 | Not Available |
| hypothetical protein | C3433_11895 | Not Available | Negative | 2487805 - 2488026 | 7826.13 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

