Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malate dehydrogenase | C3433_11675 | Not Available | Negative | 2444543 - 2445478 | 32170.1 |
| transcriptional regulator argr | C3433_11685 | Not Available | Positive | 2445915 - 2446385 | 17051.7 |
| duf1471 domain-containing protein | C3433_11690 | Not Available | Positive | 2446762 - 2447028 | 9314.13 |
| hypothetical protein | C3433_11695 | Not Available | Negative | 2447086 - 2447364 | 10966.0 |
| p-hydroxybenzoic acid efflux pump subunit aaeb | C3433_11700 | Not Available | Negative | 2447484 - 2449451 | 73360.8 |
| p-hydroxybenzoic acid efflux pump subunit aaea | C3433_11705 | Not Available | Negative | 2449457 - 2450389 | 34713.6 |
| protein aaex | C3433_11710 | Not Available | Negative | 2450397 - 2450600 | 7861.04 |
| transcriptional regulator | C3433_11715 | Not Available | Positive | 2450785 - 2451717 | 34411.9 |
| metalloprotease tldd | C3433_11720 | Not Available | Negative | 2451816 - 2453261 | 51239.0 |
| duf3971 domain-containing protein | C3433_11725 | Not Available | Negative | 2453425 - 2457225 | 138912.0 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

