Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator nanr | C3433_11615 | Not Available | Negative | 2434896 - 2435687 | 29826.4 |
| c4-dicarboxylate transporter | C3433_11620 | Not Available | Positive | 2436047 - 2437414 | 48500.6 |
| clpxp protease specificity-enhancing factor | C3433_11625 | Not Available | Negative | 2437458 - 2437961 | 18371.4 |
| stringent starvation protein a | C3433_11630 | Not Available | Negative | 2437967 - 2438605 | 24364.4 |
| 30s ribosomal protein s9 | C3433_11645 | Not Available | Negative | 2438922 - 2439314 | 14800.1 |
| 50s ribosomal protein l13 | C3433_11650 | Not Available | Negative | 2439330 - 2439758 | 15962.4 |
| cell division protein zape | C3433_11655 | Not Available | Negative | 2439977 - 2441107 | 42987.9 |
| hypothetical protein | C3433_11660 | Not Available | Positive | 2441300 - 2441698 | 14964.7 |
| serine endoprotease degq | C3433_11665 | Not Available | Positive | 2441867 - 2443234 | 47366.1 |
| outer membrane-stress sensor serine endopeptidase degs | C3433_11670 | Not Available | Positive | 2443324 - 2444391 | 37623.5 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

