Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lps export abc transporter periplasmic protein lptc | C3433_11465 | Not Available | Positive | 2402497 - 2403072 | 21712.8 |
| lipopolysaccharide abc transporter substrate-binding protein lpta | C3433_11470 | Not Available | Positive | 2403041 - 2403595 | 19956.9 |
| abc transporter atp-binding protein | C3433_11475 | Not Available | Positive | 2403602 - 2404327 | 26830.4 |
| rna polymerase factor sigma-54 | C3433_11480 | Not Available | Positive | 2404374 - 2405807 | 53918.8 |
| ribosome hibernation promoting factor | C3433_11485 | Not Available | Positive | 2405830 - 2406117 | 10806.0 |
| pts iia-like nitrogen regulatory protein ptsn | C3433_11490 | Not Available | Positive | 2406201 - 2406692 | 17862.5 |
| rnase adapter rapz | C3433_11495 | Not Available | Positive | 2406738 - 2407592 | 32538.2 |
| hpr family phosphocarrier protein | C3433_11500 | Not Available | Positive | 2407589 - 2407861 | 9794.76 |
| monofunctional biosynthetic peptidoglycan transglycosylase | C3433_11505 | Not Available | Negative | 2407960 - 2408679 | 26861.6 |
| isoprenoid biosynthesis protein elbb | C3433_11510 | Not Available | Negative | 2408676 - 2409329 | 22921.8 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

