Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome assembly rna-binding protein yhby | C3433_11360 | Not Available | Positive | 2387480 - 2387773 | 10801.4 |
| hypothetical protein | C3433_11365 | Not Available | Positive | 2387800 - 2387982 | 6671.47 |
| transcription elongation factor grea | C3433_11370 | Not Available | Negative | 2387927 - 2388403 | 17666.9 |
| serine-type d-ala-d-ala carboxypeptidase | C3433_11380 | Not Available | Positive | 2388652 - 2390085 | 51646.1 |
| gtpase obge | C3433_11385 | Not Available | Negative | 2390206 - 2391378 | 43178.2 |
| eama family transporter | C3433_11390 | Not Available | Negative | 2391394 - 2392359 | 34919.2 |
| 50s ribosomal protein l27 | C3433_11395 | Not Available | Negative | 2392487 - 2392744 | 9097.04 |
| 50s ribosomal protein l21 | C3433_11400 | Not Available | Negative | 2392764 - 2393075 | 11551.0 |
| octaprenyl diphosphate synthase | C3433_11405 | Not Available | Positive | 2393334 - 2394305 | 35341.3 |
| transcriptional regulator | C3433_11410 | Not Available | Positive | 2394527 - 2394811 | 10763.0 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

