Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoprotein nlpi | C3433_11260 | Not Available | Negative | 2365852 - 2366736 | 33539.4 |
| polyribonucleotide nucleotidyltransferase | C3433_11265 | Not Available | Negative | 2366846 - 2368978 | 76933.4 |
| 30s ribosomal protein s15 | C3433_11270 | Not Available | Negative | 2369225 - 2369494 | 10198.3 |
| trna pseudouridine(55) synthase trub | C3433_11275 | Not Available | Negative | 2369768 - 2370712 | 35134.2 |
| 30s ribosome-binding factor rbfa | C3433_11280 | Not Available | Negative | 2370712 - 2371116 | 15181.4 |
| translation initiation factor if-2 | C3433_11285 | Not Available | Negative | 2371266 - 2373956 | 97644.0 |
| transcription termination/antitermination protein nusa | C3433_11290 | Not Available | Negative | 2373981 - 2375468 | 54952.1 |
| ribosome maturation factor rimp | C3433_11295 | Not Available | Negative | 2375497 - 2375961 | 17054.5 |
| Trna-met | Not Available | Not Available | Positive | 2376157 - 2376233 | Not Available |
| argininosuccinate synthase | C3433_11305 | Not Available | Positive | 2376568 - 2377911 | 49885.3 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

