Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf805 domain-containing protein | C3433_10995 | Not Available | Positive | 2311364 - 2311729 | 14184.5 |
| lysr family transcriptional regulator | C3433_11000 | Not Available | Negative | 2311838 - 2312734 | 33116.1 |
| pirin family protein | C3433_11005 | Not Available | Positive | 2312839 - 2313540 | 25909.8 |
| hypothetical protein | C3433_11010 | Not Available | Negative | 2313834 - 2315144 | 45347.6 |
| hypothetical protein | C3433_11015 | Not Available | Negative | 2315169 - 2316500 | 48324.6 |
| l-serine ammonia-lyase | C3433_11025 | Not Available | Negative | 2317563 - 2318927 | 48329.2 |
| reactive intermediate/imine deaminase | C3433_11030 | Not Available | Negative | 2319015 - 2319410 | 14137.0 |
| formate c-acetyltransferase | C3433_11035 | Not Available | Negative | 2319424 - 2321718 | 86064.5 |
| propionate kinase | C3433_11040 | Not Available | Negative | 2321747 - 2322955 | 43681.2 |
| threonine/serine transporter tdcc | C3433_11045 | Not Available | Negative | 2322987 - 2324318 | 48849.7 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

