Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-glucosidase | C3433_10890 | Not Available | Positive | 2289204 - 2291555 | 87714.1 |
| nadph-dependent 2,4-dienoyl-coa reductase | C3433_10895 | Not Available | Positive | 2291786 - 2293804 | 72882.8 |
| 23s rrna (guanine(1835)-n(2))-methyltransferase rlmg | C3433_10900 | Not Available | Negative | 2293897 - 2295033 | 42225.7 |
| m48 family peptidase | C3433_10905 | Not Available | Positive | 2295117 - 2295617 | 19337.5 |
| oxidoreductase | C3433_10910 | Not Available | Positive | 2295690 - 2296688 | 36579.4 |
| terc family protein | C3433_10915 | Not Available | Positive | 2296960 - 2297928 | 36086.4 |
| serine/threonine transporter sstt | C3433_10920 | Not Available | Positive | 2298171 - 2299415 | 43258.1 |
| ygjv family protein | C3433_10925 | Not Available | Negative | 2299432 - 2299986 | 20845.2 |
| altronate hydrolase | C3433_10930 | Not Available | Negative | 2300136 - 2301623 | 54180.2 |
| glucuronate isomerase | C3433_10935 | Not Available | Negative | 2301638 - 2303050 | 53884.1 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

