Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| urease accessory protein uref | C3433_10475 | Not Available | Positive | 2215901 - 2216572 | 25255.3 |
| urease accessory protein ureg | C3433_10480 | Not Available | Positive | 2216582 - 2217199 | 22145.7 |
| duf1889 domain-containing protein | C3433_10750 | Not Available | Negative | 2257863 - 2258186 | 11863.2 |
| diol dehydratase reactivase subunit alpha | C3433_10755 | Not Available | Negative | 2258300 - 2260111 | 63276.0 |
| glycerol dehydrogenase | C3433_10760 | Not Available | Negative | 2260122 - 2260550 | 16035.1 |
| propanediol dehydratase | C3433_10765 | Not Available | Negative | 2260553 - 2261137 | 21493.0 |
| propanediol dehydratase | C3433_10770 | Not Available | Negative | 2261149 - 2262816 | 60526.1 |
| hypothetical protein | C3433_10775 | Not Available | Positive | 2263209 - 2263637 | 15055.4 |
| 1,3-propanediol dehydrogenase | C3433_10780 | Not Available | Positive | 2263660 - 2264823 | 41410.0 |
| hypothetical protein | C3433_10785 | Not Available | Positive | 2264840 - 2265193 | 12605.2 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

