Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerol-3-phosphate 1-o-acyltransferase plsy | C3433_10425 | Not Available | Positive | 2207312 - 2207929 | 22100.5 |
| lysr family transcriptional regulator | C3433_10430 | Not Available | Negative | 2207977 - 2208909 | 34845.9 |
| l(+)-tartrate dehydratase subunit alpha | C3433_10435 | Not Available | Positive | 2209123 - 2210031 | 32572.2 |
| l(+)-tartrate dehydratase subunit beta | C3433_10440 | Not Available | Positive | 2210028 - 2210633 | 22535.7 |
| anion permease | C3433_10445 | Not Available | Positive | 2210683 - 2212146 | 52827.6 |
| urease accessory protein | C3433_10450 | Not Available | Positive | 2212354 - 2213094 | 27658.4 |
| urease subunit gamma | C3433_10455 | Not Available | Positive | 2213105 - 2213407 | 11098.6 |
| urease subunit beta | C3433_10460 | Not Available | Positive | 2213417 - 2213737 | 11811.0 |
| urease subunit alpha | C3433_10465 | Not Available | Positive | 2213730 - 2215433 | 60495.4 |
| urease accessory protein uree | C3433_10470 | Not Available | Positive | 2215443 - 2215901 | 17033.4 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

