Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C3433_10165 | Not Available | Negative | 2150968 - 2151117 | 5863.18 |
| cystathionine beta-lyase | C3433_10170 | Not Available | Positive | 2151226 - 2152413 | 42944.4 |
| deda family protein | C3433_10175 | Not Available | Positive | 2152545 - 2153204 | 24244.4 |
| arac family transcriptional regulator | C3433_10180 | Not Available | Negative | 2153295 - 2154212 | 34521.2 |
| nadh-dependent alcohol dehydrogenase | C3433_10185 | Not Available | Positive | 2154388 - 2155551 | 42033.2 |
| 2,5-didehydrogluconate reductase dkga | C3433_10190 | Not Available | Positive | 2155776 - 2156603 | 31189.5 |
| anion permease | C3433_10195 | Not Available | Positive | 2156790 - 2158244 | 52204.9 |
| diadenosine tetraphosphate hydrolase | C3433_10200 | Not Available | Positive | 2158288 - 2158743 | 17147.5 |
| ygiq family radical sam protein | C3433_10205 | Not Available | Negative | 2158846 - 2161017 | 82030.7 |
| potassium transporter trkg | C3433_10210 | Not Available | Positive | 2161217 - 2162692 | 54700.8 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

