Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase 2 small subunit | C3433_10115 | Not Available | Negative | 2142633 - 2143751 | 39689.4 |
| duf2623 domain-containing protein | C3433_10120 | Not Available | Negative | 2143941 - 2144228 | 10763.8 |
| methyl-accepting chemotaxis protein | C3433_10125 | Not Available | Negative | 2144313 - 2145953 | 58710.1 |
| dienelactone hydrolase | C3433_10130 | Not Available | Negative | 2146172 - 2147056 | 32417.7 |
| l-glyceraldehyde 3-phosphate reductase | C3433_10135 | Not Available | Positive | 2147212 - 2148252 | 38817.4 |
| rna helicase | C3433_10140 | Not Available | Negative | 2148320 - 2148823 | 19490.3 |
| hypothetical protein | C3433_10145 | Not Available | Positive | 2148928 - 2149332 | 15109.8 |
| cytoplasmic protein | C3433_10150 | Not Available | Positive | 2149334 - 2149741 | 15647.8 |
| tonb system transport protein exbd | C3433_10155 | Not Available | Negative | 2149809 - 2150234 | 15646.0 |
| biopolymer transporter exbb | C3433_10160 | Not Available | Negative | 2150241 - 2150975 | 26209.9 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

