Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative transcriptional repressor dica | C3433_21280 | Not Available | Positive | 4353684 - 4354088 | 15413.4 |
| hypothetical protein | C3433_21285 | Not Available | Positive | 4354925 - 4355119 | 7191.43 |
| hypothetical protein | C3433_21290 | Not Available | Positive | 4355112 - 4355297 | 7030.54 |
| Exodeoxyribonuclease viii | C3433_21295 | Not Available | Positive | 4355631 - 4357499 | 68890.1 |
| hypothetical protein | C3433_21300 | Not Available | Positive | 4357783 - 4357998 | 8370.02 |
| Attr | Not Available | Not Available | Positive | 4357795 - 4357806 | Not Available |
| Putative bacteriophage integrase | C3433_21305 | Not Available | Positive | 4357998 - 4359284 | 48315.6 |
| Hybrid sensor histidine kinase - response regulator | C3433_21310 | Not Available | Positive | 4359358 - 4360029 | 25474.6 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 18 - 133 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 136 - 251 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

