Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system tip protein vgrg | C3433_10015 | Not Available | Negative | 2118644 - 2121037 | 87892.6 |
| hypothetical protein | C3433_10020 | Not Available | Negative | 2121092 - 2121493 | 15742.8 |
| hypothetical protein | C3433_10025 | Not Available | Negative | 2121500 - 2122192 | 26115.9 |
| type vi secretion system atpase tssh | C3433_10030 | Not Available | Negative | 2122185 - 2124809 | 96941.3 |
| type vi secretion system tube protein hcp | C3433_10035 | Not Available | Negative | 2124971 - 2125462 | 18756.1 |
| hypothetical protein | C3433_10040 | Not Available | Negative | 2125479 - 2127143 | 61439.3 |
| type vi secretion system protein impk | C3433_10045 | Not Available | Negative | 2127147 - 2127788 | 24240.9 |
| type vi secretion system baseplate subunit tssk | C3433_10050 | Not Available | Negative | 2127790 - 2129127 | 49198.9 |
| type vi secretion system contractile sheath large subunit | C3433_10055 | Not Available | Negative | 2129151 - 2130680 | 57661.3 |
| type vi secretion system contractile sheath small subunit | C3433_10060 | Not Available | Negative | 2130746 - 2131243 | 18839.7 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

