Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C3433_09915 | Not Available | Negative | 2093672 - 2093896 | 8348.77 |
| hypothetical protein | C3433_09920 | Not Available | Negative | 2093886 - 2095685 | 66023.8 |
| replicative dna helicase | C3433_09925 | Not Available | Negative | 2095678 - 2097042 | 50219.0 |
| hypothetical protein | C3433_09930 | Not Available | Negative | 2097039 - 2097461 | 15683.6 |
| para family protein | C3433_09935 | Not Available | Negative | 2097458 - 2098342 | 32501.3 |
| hypothetical protein | C3433_09940 | Not Available | Positive | 2099264 - 2100334 | 40158.4 |
| hypothetical protein | C3433_09945 | Not Available | Positive | 2100383 - 2100979 | 22939.3 |
| impa domain-containing protein | C3433_09950 | Not Available | Negative | 2101034 - 2102374 | 49925.6 |
| type vi secretion system baseplate subunit tsse | C3433_09955 | Not Available | Negative | 2102376 - 2102819 | 16513.2 |
| type vi secretion system lipoprotein tssj | C3433_09960 | Not Available | Negative | 2102819 - 2103352 | 19594.6 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

