Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C3433_09865 | Not Available | Negative | 2085610 - 2085828 | 7767.96 |
| duf3577 domain-containing protein | C3433_09870 | Not Available | Negative | 2085909 - 2086358 | 16489.4 |
| dna topoisomerase iii | C3433_09875 | Not Available | Negative | 2087064 - 2089082 | 73667.9 |
| tigr03761 family integrating conjugative element protein | C3433_09880 | Not Available | Negative | 2089111 - 2089950 | 31470.4 |
| hypothetical protein | C3433_09885 | Not Available | Negative | 2089971 - 2090159 | 6917.53 |
| helix-turn-helix domain-containing protein | C3433_09890 | Not Available | Negative | 2090379 - 2091659 | 47411.9 |
| hypothetical protein | C3433_09895 | Not Available | Negative | 2091819 - 2092067 | 9714.81 |
| duf2857 domain-containing protein | C3433_09900 | Not Available | Negative | 2092067 - 2092639 | 21596.9 |
| hypothetical protein | C3433_09905 | Not Available | Negative | 2092703 - 2093425 | 26781.2 |
| hypothetical protein | C3433_09910 | Not Available | Negative | 2093412 - 2093675 | 9333.41 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

