Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pilus assembly protein pilr | C3433_09815 | Not Available | Negative | 2075348 - 2076430 | 39956.1 |
| pilus assembly protein | C3433_09820 | Not Available | Negative | 2076427 - 2078142 | 62601.1 |
| type iv pilus biogenesis protein pilp | C3433_09825 | Not Available | Negative | 2078312 - 2078905 | 19808.8 |
| pilus assembly protein | C3433_09830 | Not Available | Negative | 2078892 - 2080172 | 47591.1 |
| piln family type ivb pilus formation outer membrane protein | C3433_09835 | Not Available | Negative | 2080174 - 2081757 | 55788.9 |
| pilus assembly protein pilp | C3433_09840 | Not Available | Negative | 2081868 - 2082305 | 15613.1 |
| hypothetical protein | C3433_09845 | Not Available | Negative | 2082308 - 2083537 | 43526.1 |
| hypothetical protein | C3433_09850 | Not Available | Negative | 2083633 - 2083857 | 8192.15 |
| isncy family transposase | C3433_09855 | Not Available | Negative | 2084021 - 2084995 | 36836.3 |
| single-stranded dna-binding protein | C3433_09860 | Not Available | Negative | 2085061 - 2085597 | 19453.8 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

