Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C3433_09760 | Not Available | Negative | 2066194 - 2066844 | 24321.8 |
| conjugal transfer protein traf | C3433_09765 | Not Available | Negative | 2066909 - 2067997 | 38863.1 |
| hypothetical protein | C3433_09770 | Not Available | Negative | 2068251 - 2069126 | 32849.6 |
| hypothetical protein | C3433_09775 | Not Available | Negative | 2069339 - 2069806 | 18258.9 |
| integrase | C3433_09780 | Not Available | Negative | 2069905 - 2071056 | 43282.3 |
| phage tail protein | C3433_09785 | Not Available | Positive | 2071154 - 2071525 | 13744.3 |
| hypothetical protein | C3433_09790 | Not Available | Negative | 2071600 - 2071872 | 10275.3 |
| prepilin peptidase | C3433_09800 | Not Available | Negative | 2073568 - 2074227 | 24117.5 |
| pilus assembly protein | C3433_09805 | Not Available | Negative | 2074224 - 2074703 | 18088.1 |
| pilus assembly protein pilx | C3433_09810 | Not Available | Negative | 2074716 - 2075309 | 19577.0 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

