Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integrative conjugative element protein, raqprd family | C3433_09710 | Not Available | Negative | 2057840 - 2058163 | 12041.3 |
| tigr03747 family integrating conjugative element membrane protein | C3433_09715 | Not Available | Negative | 2058311 - 2059075 | 28669.5 |
| conjugative coupling factor trad, pfgi-1 class | C3433_09720 | Not Available | Negative | 2059068 - 2061224 | 79679.2 |
| restriction endonuclease | C3433_09725 | Not Available | Negative | 2061343 - 2061906 | 21383.7 |
| integrating conjugative element protein | C3433_09730 | Not Available | Negative | 2061926 - 2062456 | 18927.9 |
| lytic transglycosylase | C3433_09735 | Not Available | Negative | 2062453 - 2063142 | 25474.6 |
| tigr03759 family integrating conjugative element protein | C3433_09740 | Not Available | Negative | 2063121 - 2063861 | 27276.4 |
| hypothetical protein | C3433_09745 | Not Available | Negative | 2063880 - 2064800 | 33054.3 |
| hypothetical protein | C3433_09750 | Not Available | Negative | 2065326 - 2065598 | 9972.14 |
| hypothetical protein | C3433_09755 | Not Available | Negative | 2065615 - 2066136 | 19215.0 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

