Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C3433_09660 | Not Available | Positive | 2049827 - 2050090 | 9688.54 |
| hypothetical protein | C3433_09665 | Not Available | Negative | 2050206 - 2050625 | 15499.6 |
| conjugative transfer atpase | C3433_09670 | Not Available | Negative | 2050622 - 2053405 | 104913.0 |
| tigr03751 family conjugal transfer lipoprotein | C3433_09675 | Not Available | Negative | 2053405 - 2053830 | 15445.5 |
| tigr03752 family integrating conjugative element protein | C3433_09680 | Not Available | Negative | 2053844 - 2055334 | 51978.6 |
| tigr03749 family integrating conjugative element protein | C3433_09685 | Not Available | Negative | 2055334 - 2056191 | 31041.6 |
| tigr03746 family integrating conjugative element protein | C3433_09690 | Not Available | Negative | 2056188 - 2056850 | 25083.9 |
| tigr03750 family conjugal transfer protein | C3433_09695 | Not Available | Negative | 2056847 - 2057236 | 14795.5 |
| tigr03745 family integrating conjugative element membrane protein | C3433_09700 | Not Available | Negative | 2057245 - 2057583 | 11956.9 |
| tigr03758 family integrating conjugative element protein | C3433_09705 | Not Available | Negative | 2057607 - 2057843 | 8582.51 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

