Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biotin-independent malonate decarboxylase subunit beta | C3433_09455 | Not Available | Positive | 2014615 - 2015448 | 29701.5 |
| biotin-independent malonate decarboxylase subunit gamma | C3433_09460 | Not Available | Positive | 2015448 - 2016248 | 28333.1 |
| aec family transporter | C3433_09465 | Not Available | Positive | 2016370 - 2017329 | 33423.6 |
| phosphoribosyl-dephospho-coa transferase | C3433_09470 | Not Available | Positive | 2017333 - 2017953 | 22713.2 |
| malonate decarboxylase subunit epsilon | C3433_09475 | Not Available | Positive | 2017950 - 2018846 | 31738.4 |
| lysr family transcriptional regulator | C3433_09480 | Not Available | Negative | 2018936 - 2019868 | 34874.6 |
| abc transporter atp-binding protein | C3433_09485 | Not Available | Negative | 2019885 - 2021786 | 71457.1 |
| glutathione-regulated potassium-efflux system ancillary protein kefg | C3433_09495 | Not Available | Positive | 2021916 - 2022470 | 21137.4 |
| glutathione-regulated potassium-efflux system protein kefb | C3433_09500 | Not Available | Positive | 2022470 - 2024275 | 66386.3 |
| hypothetical protein | C3433_09505 | Not Available | Positive | 2024284 - 2024484 | 7639.22 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

