Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| osmc family protein | C3433_09405 | Not Available | Positive | 2005572 - 2005976 | 14494.4 |
| phosphoribulokinase | C3433_09410 | Not Available | Negative | 2006075 - 2006944 | 32401.9 |
| hypothetical protein | C3433_09415 | Not Available | Negative | 2006998 - 2007216 | 8369.9 |
| hydrolase | C3433_09420 | Not Available | Negative | 2007213 - 2008235 | 38579.3 |
| nudix hydrolase | C3433_09425 | Not Available | Negative | 2008317 - 2009036 | 27199.4 |
| ribose-phosphate pyrophosphokinase | C3433_09430 | Not Available | Positive | 2009228 - 2010088 | 30982.5 |
| nicotinate phosphoribosyltransferase | C3433_09435 | Not Available | Positive | 2010103 - 2011593 | 56502.9 |
| malonate decarboxylase subunit alpha | C3433_09440 | Not Available | Positive | 2011790 - 2013445 | 60642.1 |
| triphosphoribosyl-dephospho-coa synthase mdcb | C3433_09445 | Not Available | Positive | 2013445 - 2014305 | 30221.2 |
| malonate decarboxylase acyl carrier protein | C3433_09450 | Not Available | Positive | 2014323 - 2014622 | 10694.7 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

