Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrite reductase small subunit nird | C3433_09350 | Not Available | Negative | 1994475 - 1994801 | 12199.6 |
| nitrite reductase (nad(p)h) | C3433_09355 | Not Available | Negative | 1994798 - 1997341 | 93291.9 |
| mfs transporter tsga | C3433_09360 | Not Available | Negative | 1997614 - 1998795 | 43301.2 |
| peptidylprolyl isomerase a | C3433_09365 | Not Available | Positive | 1999060 - 1999632 | 20317.3 |
| duf2559 domain-containing protein | C3433_09370 | Not Available | Positive | 1999739 - 1999906 | 6666.97 |
| cell filamentation protein fic | C3433_09375 | Not Available | Positive | 1999896 - 2000498 | 22878.3 |
| anthranilate/aminodeoxychorismate synthase component ii | C3433_09380 | Not Available | Positive | 2000530 - 2001093 | 20720.9 |
| bifunctional succinylornithine transaminase/acetylornithine transaminase | C3433_09385 | Not Available | Positive | 2001179 - 2002396 | 43574.2 |
| hypothetical protein | C3433_09390 | Not Available | Negative | 2002492 - 2004579 | 79268.6 |
| camp-activated global transcriptional regulator crp | C3433_09395 | Not Available | Negative | 2004631 - 2005263 | 23657.9 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

