Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shikimate kinase | C3433_09295 | Not Available | Positive | 1984939 - 1985460 | 19489.1 |
| 3-dehydroquinate synthase | C3433_09300 | Not Available | Positive | 1985518 - 1986606 | 38958.4 |
| cell division protein damx | C3433_09305 | Not Available | Positive | 1986703 - 1987989 | 45876.9 |
| adenine-specific dna-methyltransferase | C3433_09310 | Not Available | Positive | 1988107 - 1988943 | 32071.0 |
| ribulose-phosphate 3-epimerase | C3433_09315 | Not Available | Positive | 1988961 - 1989638 | 24621.8 |
| phosphoglycolate phosphatase | C3433_09320 | Not Available | Positive | 1989631 - 1990389 | 27342.7 |
| tryptophan--trna ligase | C3433_09325 | Not Available | Positive | 1990382 - 1991386 | 37444.9 |
| duf4223 domain-containing protein | C3433_09335 | Not Available | Negative | 1991636 - 1991806 | 5882.21 |
| uroporphyrinogen-iii c-methyltransferase | C3433_09340 | Not Available | Negative | 1992085 - 1993458 | 50074.4 |
| nitrite transporter nirc | C3433_09345 | Not Available | Negative | 1993485 - 1994288 | 28496.1 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

