Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division atp-binding protein ftse | C3433_08945 | Not Available | Positive | 1902179 - 1902847 | 24371.7 |
| cell division protein ftsx | C3433_08950 | Not Available | Positive | 1902840 - 1903898 | 38579.9 |
| rna polymerase sigma factor rpoh | C3433_08955 | Not Available | Positive | 1904169 - 1905023 | 32515.7 |
| branched-chain amino acid abc transporter substrate-binding protein | C3433_08960 | Not Available | Positive | 1905279 - 1906397 | 39632.4 |
| aspartate 1-decarboxylase autocleavage activator panm | C3433_08965 | Not Available | Negative | 1906595 - 1906978 | 14350.1 |
| duf4753 domain-containing protein | C3433_08970 | Not Available | Positive | 1907113 - 1907214 | 4112.08 |
| high-affinity branched-chain amino acid abc transporter substrate-binding protein livk | C3433_08975 | Not Available | Positive | 1907401 - 1908510 | 39520.3 |
| high-affinity branched-chain amino acid abc transporter permease livh | C3433_08980 | Not Available | Positive | 1908572 - 1909498 | 32939.3 |
| high-affinity branched-chain amino acid abc transporter permease livm | C3433_08985 | Not Available | Positive | 1909495 - 1910772 | 46381.1 |
| high-affinity branched-chain amino acid abc transporter atp-binding protein livg | C3433_08990 | Not Available | Positive | 1910769 - 1911536 | 28365.6 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

