Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alcohol dehydrogenase | C3433_08845 | Not Available | Positive | 1883207 - 1884373 | 41242.1 |
| hypothetical protein | C3433_08850 | Not Available | Positive | 1884726 - 1885793 | 39066.0 |
| multidrug abc transporter atp-binding protein | C3433_08855 | Not Available | Positive | 1885790 - 1888537 | 100966.0 |
| hypothetical protein | C3433_08860 | Not Available | Positive | 1888537 - 1889661 | 41088.4 |
| hexulose-6-phosphate synthase | C3433_08865 | Not Available | Positive | 1889739 - 1890014 | 10179.5 |
| toxin-antitoxin system hicb family antitoxin | C3433_08870 | Not Available | Positive | 1890011 - 1890370 | 13188.7 |
| nickel-responsive transcriptional regulator nikr | C3433_08875 | Not Available | Negative | 1890483 - 1890884 | 15079.7 |
| 4'-phosphopantetheinyl transferase acpt | C3433_08880 | Not Available | Negative | 1890934 - 1891512 | 20794.7 |
| permease | C3433_08885 | Not Available | Negative | 1891575 - 1892624 | 38397.5 |
| mfs transporter | C3433_08890 | Not Available | Positive | 1892758 - 1893975 | 42080.1 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

