Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (guanine(1516)-n(2))-methyltransferase rsmj | C3433_08740 | Not Available | Positive | 1860084 - 1860833 | 26857.6 |
| hypothetical protein | C3433_08750 | Not Available | Negative | 1861210 - 1861626 | 15091.2 |
| fad-dependent oxidoreductase | C3433_08755 | Not Available | Negative | 1861670 - 1862869 | 43183.4 |
| rrf2 family transcriptional regulator | C3433_08760 | Not Available | Positive | 1863102 - 1863605 | 18856.8 |
| dipeptide/tripeptide permease dtpb | C3433_08765 | Not Available | Negative | 1863692 - 1865164 | 53672.4 |
| universal stress protein uspa | C3433_08770 | Not Available | Negative | 1865446 - 1865883 | 16124.4 |
| universal stress protein uspb | C3433_08775 | Not Available | Positive | 1866277 - 1866612 | 12932.1 |
| anion permease | C3433_08780 | Not Available | Negative | 1866677 - 1868176 | 53421.6 |
| aminoacetone oxidase family fad-binding enzyme | C3433_08785 | Not Available | Positive | 1868406 - 1869602 | 43542.2 |
| fadr family transcriptional regulator | C3433_08790 | Not Available | Positive | 1869711 - 1870382 | 25078.1 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

