Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysozyme | C3433_08690 | Not Available | Negative | 1846874 - 1847224 | 13201.0 |
| gnat family n-acetyltransferase | C3433_08695 | Not Available | Negative | 1847311 - 1847850 | 20272.0 |
| hypothetical protein | C3433_08700 | Not Available | Positive | 1848018 - 1849607 | 60393.8 |
| alpha,alpha-trehalase | C3433_08705 | Not Available | Negative | 1849618 - 1851267 | 63542.7 |
| cytochrome-c peroxidase | C3433_08710 | Not Available | Positive | 1851695 - 1853089 | 51375.0 |
| lysr family transcriptional regulator | C3433_08715 | Not Available | Negative | 1853155 - 1854081 | 34425.3 |
| mandelate racemase | C3433_08720 | Not Available | Positive | 1854265 - 1855428 | 43029.4 |
| glutathione-disulfide reductase | C3433_08725 | Not Available | Negative | 1855525 - 1856877 | 48702.4 |
| 23s rrna (adenine(2030)-n(6))-methyltransferase rlmj | C3433_08730 | Not Available | Negative | 1856982 - 1857824 | 32045.4 |
| oligopeptidase a | C3433_08735 | Not Available | Positive | 1858033 - 1860075 | 77104.1 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

