Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | C3433_08640 | Not Available | Negative | 1836120 - 1837442 | 47123.7 |
| inner membrane protein yhjd | C3433_08645 | Not Available | Negative | 1837793 - 1838818 | 38422.5 |
| lysr family transcriptional regulator | C3433_08650 | Not Available | Negative | 1838866 - 1839765 | 33324.4 |
| short-chain dehydrogenase | C3433_08655 | Not Available | Positive | 1839885 - 1840643 | 26949.3 |
| hypothetical protein | C3433_08660 | Not Available | Negative | 1840660 - 1841124 | 17489.8 |
| hypothetical protein | C3433_08665 | Not Available | Negative | 1841111 - 1841905 | 30111.8 |
| hypothetical protein | C3433_08670 | Not Available | Positive | 1842473 - 1842913 | 17242.9 |
| methyl-accepting chemotaxis protein | C3433_08675 | Not Available | Positive | 1843052 - 1844989 | 69800.0 |
| eal domain-containing protein | C3433_08680 | Not Available | Positive | 1845041 - 1845889 | 31614.3 |
| helix-turn-helix transcriptional regulator | C3433_08685 | Not Available | Positive | 1846253 - 1846855 | 22376.2 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

