Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | C3433_08580 | Not Available | Positive | 1822097 - 1823299 | 45471.5 |
| transporter | C3433_08585 | Not Available | Negative | 1823333 - 1824631 | 48073.4 |
| methionine gamma-lyase | C3433_08590 | Not Available | Negative | 1824749 - 1825945 | 42866.5 |
| small toxic polypeptide ldrd | C3433_08595 | Not Available | Positive | 1826312 - 1826479 | 5953.33 |
| biofilm formation regulator hmsp | C3433_08600 | Not Available | Positive | 1826706 - 1828712 | 75416.5 |
| dicarboxylate/amino acid:cation symporter | C3433_08610 | Not Available | Positive | 1828870 - 1830156 | 45484.2 |
| hypothetical protein | C3433_08620 | Not Available | Positive | 1830379 - 1831872 | 55414.1 |
| ketodeoxygluconokinase | C3433_08625 | Not Available | Negative | 1831971 - 1832900 | 33944.2 |
| cyclic-guanylate-specific phosphodiesterase | C3433_08630 | Not Available | Positive | 1833131 - 1833898 | 29317.5 |
| asma family protein | C3433_08635 | Not Available | Positive | 1833976 - 1836036 | 74708.1 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

