Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Major capsid head protein precursor | C3433_21130 | Not Available | Negative | 4329062 - 4330348 | 46191.2 |
| Putative head maturation protease | C3433_21135 | Not Available | Negative | 4330422 - 4331342 | 33103.6 |
| Putative portal protein | C3433_21140 | Not Available | Negative | 4331379 - 4332638 | 46874.4 |
| Gp3 | C3433_21145 | Not Available | Negative | 4332638 - 4332817 | 5950.52 |
| Terminase large subunit | C3433_21150 | Not Available | Negative | 4332811 - 4334538 | 64966.1 |
| Terminase small subunit | C3433_21155 | Not Available | Negative | 4334535 - 4335041 | 18309.3 |
| Hypothetical protein | C3433_21160 | Not Available | Positive | 4335248 - 4335763 | 19328.6 |
| Gp60 | C3433_21165 | Not Available | Negative | 4335899 - 4336261 | 13992.5 |
| cytochrome b | C3433_21170 | Not Available | Positive | 4336539 - 4337078 | 20473.7 |
| hypothetical protein | C3433_21175 | Not Available | Negative | 4337420 - 4338097 | 24847.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

