Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-dehydro-3-deoxygluconokinase | C3433_08475 | Not Available | Negative | 1803771 - 1804709 | 33391.8 |
| xylose isomerase | C3433_08480 | Not Available | Negative | 1804713 - 1805462 | 27492.8 |
| laci family transcriptional regulator | C3433_08485 | Not Available | Negative | 1805562 - 1806578 | 36893.4 |
| ompa family lipoprotein | C3433_08490 | Not Available | Negative | 1806720 - 1807382 | 22304.7 |
| trimethylamine-n-oxide reductase tora | C3433_08495 | Not Available | Positive | 1807542 - 1809875 | 85820.5 |
| n-acetyltransferase | C3433_08500 | Not Available | Negative | 1809844 - 1810284 | 16824.9 |
| dna-3-methyladenine glycosylase i | C3433_08505 | Not Available | Negative | 1810274 - 1810843 | 21276.2 |
| autotransporter outer membrane beta-barrel domain-containing protein | C3433_08510 | Not Available | Positive | 1811003 - 1811704 | 25734.8 |
| oxalate/formate antiport family mfs transporter | C3433_08515 | Not Available | Positive | 1811956 - 1813158 | 42757.1 |
| kdo(2)-lipid a phosphoethanolamine 7''-transferase | C3433_08520 | Not Available | Positive | 1813370 - 1815064 | 64585.9 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

