Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C3433_08375 | Not Available | Positive | 1782631 - 1783977 | 50541.7 |
| valine--pyruvate transaminase | C3433_08380 | Not Available | Negative | 1784017 - 1785273 | 46975.0 |
| alpha-amylase | C3433_08385 | Not Available | Negative | 1785449 - 1787479 | 75231.0 |
| hypothetical protein | C3433_08390 | Not Available | Negative | 1787582 - 1787848 | 10090.7 |
| hypothetical protein | C3433_08395 | Not Available | Positive | 1787796 - 1788620 | 30908.2 |
| xylr family transcriptional regulator | C3433_08400 | Not Available | Negative | 1788694 - 1789872 | 44710.2 |
| xylose isomerase | C3433_08405 | Not Available | Positive | 1790233 - 1791555 | 49590.5 |
| xylulokinase | C3433_08410 | Not Available | Positive | 1791627 - 1793081 | 52685.4 |
| hypothetical protein | C3433_08415 | Not Available | Positive | 1793249 - 1793617 | 13464.0 |
| hypothetical protein | C3433_08420 | Not Available | Positive | 1793618 - 1794055 | 15954.3 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

