Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-ribulose-5-phosphate 4-epimerase | C3433_08325 | Not Available | Negative | 1773388 - 1774086 | 25664.5 |
| xylulose 5-phosphate 3-epimerase | C3433_08330 | Not Available | Negative | 1774080 - 1774940 | 32365.8 |
| 3-keto-l-gulonate-6-phosphate decarboxylase | C3433_08335 | Not Available | Negative | 1774933 - 1775595 | 23563.1 |
| carbohydrate kinase | C3433_08340 | Not Available | Negative | 1775595 - 1777097 | 55110.6 |
| 2-ketogluconate transporter | C3433_08345 | Not Available | Negative | 1777196 - 1778515 | 47432.4 |
| duf4862 domain-containing protein | C3433_08350 | Not Available | Negative | 1778547 - 1779479 | 34327.7 |
| yhch/yjgk/yial family protein | C3433_08355 | Not Available | Negative | 1779492 - 1779956 | 17490.0 |
| 3-dehydro-l-gulonate 2-dehydrogenase | C3433_08360 | Not Available | Negative | 1779968 - 1780966 | 36601.9 |
| iclr family transcriptional regulator | C3433_08365 | Not Available | Positive | 1781184 - 1781999 | 29859.0 |
| electron transporter | C3433_08370 | Not Available | Positive | 1782116 - 1782607 | 17850.5 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

