Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C3433_07820 | Not Available | Positive | 1671284 - 1671700 | 15523.1 |
| lipoprotein nlpa | C3433_07825 | Not Available | Positive | 1671824 - 1672642 | 29441.4 |
| eama family transporter | C3433_07830 | Not Available | Negative | 1672671 - 1673573 | 32199.5 |
| lysr family transcriptional regulator | C3433_07835 | Not Available | Negative | 1673599 - 1674543 | 34777.1 |
| sugar dehydrogenase | C3433_07840 | Not Available | Positive | 1674689 - 1675465 | 27224.8 |
| antibiotic biosynthesis monooxygenase | C3433_07845 | Not Available | Negative | 1675505 - 1675810 | 11367.9 |
| zinc-binding alcohol dehydrogenase family protein | C3433_07850 | Not Available | Negative | 1675812 - 1676819 | 36278.5 |
| lysr family transcriptional regulator | C3433_07855 | Not Available | Positive | 1676924 - 1677826 | 33763.6 |
| dipeptidase | C3433_07860 | Not Available | Negative | 1677862 - 1679358 | 55835.0 |
| hypothetical protein | C3433_07865 | Not Available | Negative | 1679701 - 1680165 | 17501.9 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

