Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-serine transporter dsdx | C3433_07670 | Not Available | Negative | 1640810 - 1642147 | 46947.9 |
| dna-binding transcriptional regulator dsdc | C3433_07675 | Not Available | Positive | 1642377 - 1643303 | 34891.5 |
| hypothetical protein | C3433_07680 | Not Available | Positive | 1643381 - 1644463 | 40011.1 |
| multidrug transporter emrd | C3433_07685 | Not Available | Negative | 1644390 - 1645574 | 42177.4 |
| eama family transporter | C3433_07690 | Not Available | Negative | 1645768 - 1646601 | 29169.6 |
| type i toxin-antitoxin system toxin tisb | C3433_07695 | Not Available | Negative | 1646724 - 1646813 | 3181.26 |
| ilvb operon leader peptide ivbl | C3433_07700 | Not Available | Positive | 1647336 - 1647434 | 3263.17 |
| acetolactate synthase, large subunit, biosynthetic type | C3433_07705 | Not Available | Positive | 1647542 - 1649230 | 60530.3 |
| acetolactate synthase isozyme 1 small subunit | C3433_07710 | Not Available | Positive | 1649234 - 1649524 | 11068.4 |
| transcriptional regulator uhpa | C3433_07715 | Not Available | Positive | 1649679 - 1650272 | 20933.6 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

