Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug transporter mdtl | C3433_07520 | Not Available | Negative | 1608750 - 1609931 | 41895.6 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | C3433_07525 | Not Available | Negative | 1610114 - 1611478 | 49081.6 |
| membrane protein insertase yidc | C3433_07530 | Not Available | Negative | 1611586 - 1613232 | 61577.3 |
| membrane protein insertion efficiency factor yidd | C3433_07535 | Not Available | Negative | 1613235 - 1613492 | 9371.57 |
| ribonuclease p protein component | C3433_07540 | Not Available | Negative | 1613456 - 1613815 | 13785.1 |
| 50s ribosomal protein l34 | C3433_07545 | Not Available | Negative | 1613833 - 1613973 | 5409.74 |
| chromosomal replication initiator protein dnaa | C3433_07550 | Not Available | Positive | 1614580 - 1615983 | 52733.1 |
| dna polymerase iii subunit beta | C3433_07555 | Not Available | Positive | 1615988 - 1617088 | 40557.0 |
| dna replication and repair protein recf | C3433_07560 | Not Available | Positive | 1617286 - 1618359 | 40445.2 |
| dna topoisomerase (atp-hydrolyzing) subunit b | C3433_07565 | Not Available | Positive | 1618388 - 1620802 | 89775.8 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

